Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia.
Identifieur interne : 000880 ( Main/Exploration ); précédent : 000879; suivant : 000881Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia.
Auteurs : M F Mideros [Colombie] ; D A Turissini [États-Unis] ; N. Guayazán [Colombie] ; H. Ibarra-Avila [Colombie] ; G. Danies [Colombie] ; M. Cárdenas [Colombie] ; K. Myers [États-Unis] ; J. Tabima [États-Unis] ; E M Goss [États-Unis] ; A. Bernal [Colombie] ; L E Lagos [Colombie] ; A. Grajales [Colombie] ; L N Gonzalez [Colombie] ; D E L. Cooke [Royaume-Uni] ; W E Fry [États-Unis] ; N. Grünwald [États-Unis] ; D R Matute [États-Unis] ; S. Restrepo [Colombie]Source :
- Persoonia [ 0031-5850 ] ; 2018.
Abstract
Over the past few years, symptoms akin to late blight disease have been reported on a variety of crop plants in South America. Despite the economic importance of these crops, the causal agents of the diseases belonging to the genus Phytophthora have not been completely characterized. In this study, a new Phytophthora species was described in Colombia from tree tomato (Solanum betaceum), a semi-domesticated fruit grown in northern South America. Comprehensive phylogenetic, morphological, population genetic analyses, and infection assays to characterize this new species, were conducted. All data support the description of the new species, Phytophthora betacei sp. nov. Phylogenetic analyses suggest that this new species belongs to clade 1c of the genus Phytophthora and is a close relative of the potato late blight pathogen, P. infestans. Furthermore, it appeared as the sister group of the P. andina strains collected from wild Solanaceae (clonal lineage EC-2). Analyses of morphological and physiological characters as well as host specificity showed high support for the differentiation of these species. Based on these results, a complete description of the new species is provided and the species boundaries within Phytophthora clade 1c in northern South America are discussed.
DOI: 10.3767/persoonia.2018.41.03
PubMed: 30728598
PubMed Central: PMC6344807
Affiliations:
- Colombie, Royaume-Uni, États-Unis
- Floride, Oregon, État de New York
- Ithaca (New York)
- Université Cornell
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en"><i>Phytophthora betacei</i>, a new species within <i>Phytophthora</i> clade 1c causing late blight on <i>Solanum betaceum</i> in Colombia.</title><author><name sortKey="Mideros, M F" sort="Mideros, M F" uniqKey="Mideros M" first="M F" last="Mideros">M F Mideros</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Turissini, D A" sort="Turissini, D A" uniqKey="Turissini D" first="D A" last="Turissini">D A Turissini</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Biology Department, University of North Carolina, Chapel Hill</wicri:regionArea><wicri:noRegion>Chapel Hill</wicri:noRegion></affiliation></author><author><name sortKey="Guayazan, N" sort="Guayazan, N" uniqKey="Guayazan N" first="N" last="Guayazán">N. Guayazán</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Ibarra Avila, H" sort="Ibarra Avila, H" uniqKey="Ibarra Avila H" first="H" last="Ibarra-Avila">H. Ibarra-Avila</name><affiliation wicri:level="1"><nlm:affiliation>Head of Microscopy Core (MCUA), Vice-Presidency of Research, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Head of Microscopy Core (MCUA), Vice-Presidency of Research, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Danies, G" sort="Danies, G" uniqKey="Danies G" first="G" last="Danies">G. Danies</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Biology Department, Universidad de Nariño, Pasto</wicri:regionArea><wicri:noRegion>Pasto</wicri:noRegion></affiliation></author><author><name sortKey="Cardenas, M" sort="Cardenas, M" uniqKey="Cardenas M" first="M" last="Cárdenas">M. Cárdenas</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Myers, K" sort="Myers, K" uniqKey="Myers K" first="K" last="Myers">K. Myers</name><affiliation wicri:level="4"><nlm:affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY</wicri:regionArea><placeName><region type="state">État de New York</region><settlement type="city">Ithaca (New York)</settlement></placeName><orgName type="university">Université Cornell</orgName></affiliation></author><author><name sortKey="Tabima, J" sort="Tabima, J" uniqKey="Tabima J" first="J" last="Tabima">J. Tabima</name><affiliation wicri:level="2"><nlm:affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Goss, E M" sort="Goss, E M" uniqKey="Goss E" first="E M" last="Goss">E M Goss</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Bernal, A" sort="Bernal, A" uniqKey="Bernal A" first="A" last="Bernal">A. Bernal</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Lagos, L E" sort="Lagos, L E" uniqKey="Lagos L" first="L E" last="Lagos">L E Lagos</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Biology Department, Universidad de Nariño, Pasto</wicri:regionArea><wicri:noRegion>Pasto</wicri:noRegion></affiliation></author><author><name sortKey="Grajales, A" sort="Grajales, A" uniqKey="Grajales A" first="A" last="Grajales">A. Grajales</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Gonzalez, L N" sort="Gonzalez, L N" uniqKey="Gonzalez L" first="L N" last="Gonzalez">L N Gonzalez</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Cooke, D E L" sort="Cooke, D E L" uniqKey="Cooke D" first="D E L" last="Cooke">D E L. Cooke</name><affiliation wicri:level="1"><nlm:affiliation>Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland</wicri:regionArea><wicri:noRegion>Scotland</wicri:noRegion></affiliation></author><author><name sortKey="Fry, W E" sort="Fry, W E" uniqKey="Fry W" first="W E" last="Fry">W E Fry</name><affiliation wicri:level="4"><nlm:affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY</wicri:regionArea><placeName><region type="state">État de New York</region><settlement type="city">Ithaca (New York)</settlement></placeName><orgName type="university">Université Cornell</orgName></affiliation></author><author><name sortKey="Grunwald, N" sort="Grunwald, N" uniqKey="Grunwald N" first="N" last="Grünwald">N. Grünwald</name><affiliation wicri:level="2"><nlm:affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Matute, D R" sort="Matute, D R" uniqKey="Matute D" first="D R" last="Matute">D R Matute</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Biology Department, University of North Carolina, Chapel Hill</wicri:regionArea><wicri:noRegion>Chapel Hill</wicri:noRegion></affiliation></author><author><name sortKey="Restrepo, S" sort="Restrepo, S" uniqKey="Restrepo S" first="S" last="Restrepo">S. Restrepo</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2018">2018</date><idno type="RBID">pubmed:30728598</idno><idno type="pmid">30728598</idno><idno type="doi">10.3767/persoonia.2018.41.03</idno><idno type="pmc">PMC6344807</idno><idno type="wicri:Area/Main/Corpus">000551</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000551</idno><idno type="wicri:Area/Main/Curation">000551</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000551</idno><idno type="wicri:Area/Main/Exploration">000551</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en"><i>Phytophthora betacei</i>, a new species within <i>Phytophthora</i> clade 1c causing late blight on <i>Solanum betaceum</i> in Colombia.</title><author><name sortKey="Mideros, M F" sort="Mideros, M F" uniqKey="Mideros M" first="M F" last="Mideros">M F Mideros</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Turissini, D A" sort="Turissini, D A" uniqKey="Turissini D" first="D A" last="Turissini">D A Turissini</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Biology Department, University of North Carolina, Chapel Hill</wicri:regionArea><wicri:noRegion>Chapel Hill</wicri:noRegion></affiliation></author><author><name sortKey="Guayazan, N" sort="Guayazan, N" uniqKey="Guayazan N" first="N" last="Guayazán">N. Guayazán</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Ibarra Avila, H" sort="Ibarra Avila, H" uniqKey="Ibarra Avila H" first="H" last="Ibarra-Avila">H. Ibarra-Avila</name><affiliation wicri:level="1"><nlm:affiliation>Head of Microscopy Core (MCUA), Vice-Presidency of Research, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Head of Microscopy Core (MCUA), Vice-Presidency of Research, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Danies, G" sort="Danies, G" uniqKey="Danies G" first="G" last="Danies">G. Danies</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Biology Department, Universidad de Nariño, Pasto</wicri:regionArea><wicri:noRegion>Pasto</wicri:noRegion></affiliation></author><author><name sortKey="Cardenas, M" sort="Cardenas, M" uniqKey="Cardenas M" first="M" last="Cárdenas">M. Cárdenas</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Myers, K" sort="Myers, K" uniqKey="Myers K" first="K" last="Myers">K. Myers</name><affiliation wicri:level="4"><nlm:affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY</wicri:regionArea><placeName><region type="state">État de New York</region><settlement type="city">Ithaca (New York)</settlement></placeName><orgName type="university">Université Cornell</orgName></affiliation></author><author><name sortKey="Tabima, J" sort="Tabima, J" uniqKey="Tabima J" first="J" last="Tabima">J. Tabima</name><affiliation wicri:level="2"><nlm:affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Goss, E M" sort="Goss, E M" uniqKey="Goss E" first="E M" last="Goss">E M Goss</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Bernal, A" sort="Bernal, A" uniqKey="Bernal A" first="A" last="Bernal">A. Bernal</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Lagos, L E" sort="Lagos, L E" uniqKey="Lagos L" first="L E" last="Lagos">L E Lagos</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Biology Department, Universidad de Nariño, Pasto</wicri:regionArea><wicri:noRegion>Pasto</wicri:noRegion></affiliation></author><author><name sortKey="Grajales, A" sort="Grajales, A" uniqKey="Grajales A" first="A" last="Grajales">A. Grajales</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Gonzalez, L N" sort="Gonzalez, L N" uniqKey="Gonzalez L" first="L N" last="Gonzalez">L N Gonzalez</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author><author><name sortKey="Cooke, D E L" sort="Cooke, D E L" uniqKey="Cooke D" first="D E L" last="Cooke">D E L. Cooke</name><affiliation wicri:level="1"><nlm:affiliation>Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland</wicri:regionArea><wicri:noRegion>Scotland</wicri:noRegion></affiliation></author><author><name sortKey="Fry, W E" sort="Fry, W E" uniqKey="Fry W" first="W E" last="Fry">W E Fry</name><affiliation wicri:level="4"><nlm:affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY</wicri:regionArea><placeName><region type="state">État de New York</region><settlement type="city">Ithaca (New York)</settlement></placeName><orgName type="university">Université Cornell</orgName></affiliation></author><author><name sortKey="Grunwald, N" sort="Grunwald, N" uniqKey="Grunwald N" first="N" last="Grünwald">N. Grünwald</name><affiliation wicri:level="2"><nlm:affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Matute, D R" sort="Matute, D R" uniqKey="Matute D" first="D R" last="Matute">D R Matute</name><affiliation wicri:level="1"><nlm:affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Biology Department, University of North Carolina, Chapel Hill</wicri:regionArea><wicri:noRegion>Chapel Hill</wicri:noRegion></affiliation></author><author><name sortKey="Restrepo, S" sort="Restrepo, S" uniqKey="Restrepo S" first="S" last="Restrepo">S. Restrepo</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Department of Biological Sciences, Universidad de Los Andes, Bogotá</wicri:regionArea><wicri:noRegion>Bogotá</wicri:noRegion></affiliation></author></analytic><series><title level="j">Persoonia</title><idno type="ISSN">0031-5850</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Over the past few years, symptoms akin to late blight disease have been reported on a variety of crop plants in South America. Despite the economic importance of these crops, the causal agents of the diseases belonging to the genus <i>Phytophthora</i> have not been completely characterized. In this study, a new <i>Phytophthora</i> species was described in Colombia from tree tomato (<i>Solanum betaceum</i>), a semi-domesticated fruit grown in northern South America. Comprehensive phylogenetic, morphological, population genetic analyses, and infection assays to characterize this new species, were conducted. All data support the description of the new species, <i>Phytophthora betacei</i> sp. nov. Phylogenetic analyses suggest that this new species belongs to clade 1c of the genus <i>Phytophthora</i> and is a close relative of the potato late blight pathogen, <i>P. infestans</i>. Furthermore, it appeared as the sister group of the <i>P. andina</i> strains collected from wild <i>Solanaceae</i> (clonal lineage EC-2). Analyses of morphological and physiological characters as well as host specificity showed high support for the differentiation of these species. Based on these results, a complete description of the new species is provided and the species boundaries within <i>Phytophthora</i> clade 1c in northern South America are discussed.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">30728598</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0031-5850</ISSN><JournalIssue CitedMedium="Print"><Volume>41</Volume><PubDate><Year>2018</Year><Month>Dec</Month></PubDate></JournalIssue><Title>Persoonia</Title><ISOAbbreviation>Persoonia</ISOAbbreviation></Journal><ArticleTitle><i>Phytophthora betacei</i>, a new species within <i>Phytophthora</i> clade 1c causing late blight on <i>Solanum betaceum</i> in Colombia.</ArticleTitle><Pagination><MedlinePgn>39-55</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3767/persoonia.2018.41.03</ELocationID><Abstract><AbstractText>Over the past few years, symptoms akin to late blight disease have been reported on a variety of crop plants in South America. Despite the economic importance of these crops, the causal agents of the diseases belonging to the genus <i>Phytophthora</i> have not been completely characterized. In this study, a new <i>Phytophthora</i> species was described in Colombia from tree tomato (<i>Solanum betaceum</i>), a semi-domesticated fruit grown in northern South America. Comprehensive phylogenetic, morphological, population genetic analyses, and infection assays to characterize this new species, were conducted. All data support the description of the new species, <i>Phytophthora betacei</i> sp. nov. Phylogenetic analyses suggest that this new species belongs to clade 1c of the genus <i>Phytophthora</i> and is a close relative of the potato late blight pathogen, <i>P. infestans</i>. Furthermore, it appeared as the sister group of the <i>P. andina</i> strains collected from wild <i>Solanaceae</i> (clonal lineage EC-2). Analyses of morphological and physiological characters as well as host specificity showed high support for the differentiation of these species. Based on these results, a complete description of the new species is provided and the species boundaries within <i>Phytophthora</i> clade 1c in northern South America are discussed.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mideros</LastName><ForeName>M F</ForeName><Initials>MF</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Turissini</LastName><ForeName>D A</ForeName><Initials>DA</Initials><AffiliationInfo><Affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Guayazán</LastName><ForeName>N</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ibarra-Avila</LastName><ForeName>H</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Head of Microscopy Core (MCUA), Vice-Presidency of Research, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Danies</LastName><ForeName>G</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cárdenas</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Myers</LastName><ForeName>K</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tabima</LastName><ForeName>J</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Goss</LastName><ForeName>E M</ForeName><Initials>EM</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bernal</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lagos</LastName><ForeName>L E</ForeName><Initials>LE</Initials><AffiliationInfo><Affiliation>Biology Department, Universidad de Nariño, Pasto, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grajales</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gonzalez</LastName><ForeName>L N</ForeName><Initials>LN</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cooke</LastName><ForeName>D E L</ForeName><Initials>DEL</Initials><AffiliationInfo><Affiliation>Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fry</LastName><ForeName>W E</ForeName><Initials>WE</Initials><AffiliationInfo><Affiliation>School of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell University, Ithaca, NY, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grünwald</LastName><ForeName>N</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Horticultural Crops Research Laboratory, USDA Agricultural Research Service, Corvallis, Oregon, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Matute</LastName><ForeName>D R</ForeName><Initials>DR</Initials><AffiliationInfo><Affiliation>Biology Department, University of North Carolina, Chapel Hill, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Restrepo</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, Universidad de Los Andes, Bogotá, Colombia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Persoonia</MedlineTA><NlmUniqueID>19540520R</NlmUniqueID><ISSNLinking>0031-5850</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">host specificity</Keyword><Keyword MajorTopicYN="N">microsatellites</Keyword><Keyword MajorTopicYN="N">oomycetes</Keyword><Keyword MajorTopicYN="N">species delimitation</Keyword><Keyword MajorTopicYN="N">tree tomato</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>03</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>09</Month><Day>12</Day></PubMedPubDate><PubMedPubDate 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